Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-513a-3p in IDC Breast Radvanyi Cluster 2 Table contains all genes in the IDC Breast Radvanyi cluster number 2. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-513a-3p 9525 VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:10895] T 7357 UGCG UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:12524] zzz999 91603 ZNF830 zinc finger protein 830 [Source:HGNC Symbol;Acc:28291] T 4548 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:7468] T 7162 TPBG trophoblast glycoprotein [Source:HGNC Symbol;Acc:12004] zzz999 51341 ZBTB7A zinc finger and BTB domain containing 7A [Source:HGNC Symbol;Acc:18078] T 7296 zzz999 zzz999 zzz999 84750 FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase) [Source:HGNC Symbol;Acc:19234] T 92259 MRPS36 mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:16631] T 599 BCL2L2 BCL2-like 2 [Source:HGNC Symbol;Acc:995] zzz999 8576 STK16 serine/threonine kinase 16 [Source:HGNC Symbol;Acc:11394] zzz999 6734 SRPR signal recognition particle receptor (docking protein) [Source:HGNC Symbol;Acc:11307] zzz999 54414 SIAE sialic acid acetylesterase [Source:HGNC Symbol;Acc:18187] zzz999 5966 REL v-rel reticuloendotheliosis viral oncogene homolog (avian) [Source:HGNC Symbol;Acc:9954] zzz999 55039 TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26091] zzz999 115950 ZNF653 zinc finger protein 653 [Source:HGNC Symbol;Acc:25196] zzz999 4698 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa [Source:HGNC Symbol;Acc:7688] T 3667 IRS1 insulin receptor substrate 1 [Source:HGNC Symbol;Acc:6125] zzz999 55591 VEZT vezatin, adherens junctions transmembrane protein [Source:HGNC Symbol;Acc:18258] T 3035 HARS histidyl-tRNA synthetase [Source:HGNC Symbol;Acc:4816] zzz999 55737 VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487] T 51699 VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:14340] T 5566 PRKACA protein kinase, cAMP-dependent, catalytic, alpha [Source:HGNC Symbol;Acc:9380] zzz999 80818 ZNF436 zinc finger protein 436 [Source:HGNC Symbol;Acc:20814] zzz999 51360 MBTPS2 membrane-bound transcription factor peptidase, site 2 [Source:HGNC Symbol;Acc:15455] zzz999 5742 PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) [Source:HGNC Symbol;Acc:9604] zzz999 5189 PEX1 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:8850] T 55280 CWF19L1 CWF19-like 1, cell cycle control (S. pombe) [Source:HGNC Symbol;Acc:25613] zzz999 55631 LRRC40 leucine rich repeat containing 40 [Source:HGNC Symbol;Acc:26004] T 79882 ZC3H14 zinc finger CCCH-type containing 14 [Source:HGNC Symbol;Acc:20509] T 54872 PIGG phosphatidylinositol glycan anchor biosynthesis, class G [Source:HGNC Symbol;Acc:25985] zzz999 23172 FAM175B family with sequence similarity 175, member B [Source:HGNC Symbol;Acc:28975] P T 219927 MRPL21 mitochondrial ribosomal protein L21 [Source:HGNC Symbol;Acc:14479] zzz999 22876 INPP5F inositol polyphosphate-5-phosphatase F [Source:HGNC Symbol;Acc:17054] T 4077 NBR1 neighbor of BRCA1 gene 1 [Source:HGNC Symbol;Acc:6746] T 373 TRIM23 tripartite motif containing 23 [Source:HGNC Symbol;Acc:660] zzz999 64840 PORCN porcupine homolog (Drosophila) [Source:HGNC Symbol;Acc:17652] zzz999 158584 FAAH2 fatty acid amide hydrolase 2 [Source:HGNC Symbol;Acc:26440] zzz999 6386 SDCBP syndecan binding protein (syntenin) [Source:HGNC Symbol;Acc:10662] zzz999 125170 SMCR7 Smith-Magenis syndrome chromosome region, candidate 7 [Source:HGNC Symbol;Acc:17920] zzz999 8443 GNPAT glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:4416] zzz999 84705 GTPBP3 GTP binding protein 3 (mitochondrial) [Source:HGNC Symbol;Acc:14880] T 10920 COPS8 COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) [Source:HGNC Symbol;Acc:24335] T 54407 SLC38A2 solute carrier family 38, member 2 [Source:HGNC Symbol;Acc:13448] P T 2967 GTF2H3 general transcription factor IIH, polypeptide 3, 34kDa [Source:HGNC Symbol;Acc:4657] T 56950 SMYD2 SET and MYND domain containing 2 [Source:HGNC Symbol;Acc:20982] zzz999 51098 IFT52 intraflagellar transport 52 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:15901] zzz999 220869 CBWD5 COBW domain containing 5 [Source:HGNC Symbol;Acc:24584] zzz999 136227 EMID2 EMI domain containing 2 [Source:HGNC Symbol;Acc:18038] zzz999 79674 VEPH1 ventricular zone expressed PH domain homolog 1 (zebrafish) [Source:HGNC Symbol;Acc:25735] T 30061 SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1 [Source:HGNC Symbol;Acc:10909] zzz999 6341 SCO1 SCO cytochrome oxidase deficient homolog 1 (yeast) [Source:HGNC Symbol;Acc:10603] zzz999 84280 BTBD10 BTB (POZ) domain containing 10 [Source:HGNC Symbol;Acc:21445] zzz999 28991 COMMD5 COMM domain containing 5 [Source:HGNC Symbol;Acc:17902] zzz999 1140 CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle) [Source:HGNC Symbol;Acc:1961] T 6302 TSPAN31 tetraspanin 31 [Source:HGNC Symbol;Acc:10539] zzz999 6717 SRI sorcin [Source:HGNC Symbol;Acc:11292] T 54969 C4orf27 chromosome 4 open reading frame 27 [Source:HGNC Symbol;Acc:26051] zzz999 10522 DEAF1 deformed epidermal autoregulatory factor 1 (Drosophila) [Source:HGNC Symbol;Acc:14677] zzz999 6883 TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa [Source:HGNC Symbol;Acc:11545] zzz999 91057 CCDC34 coiled-coil domain containing 34 [Source:HGNC Symbol;Acc:25079] T 10184 LHFPL2 lipoma HMGIC fusion partner-like 2 [Source:HGNC Symbol;Acc:6588] T 56943 ENY2 enhancer of yellow 2 homolog (Drosophila) [Source:HGNC Symbol;Acc:24449] zzz999 219899 TBCEL tubulin folding cofactor E-like [Source:HGNC Symbol;Acc:28115] zzz999 11123 RCAN3 RCAN family member 3 [Source:HGNC Symbol;Acc:3042] T 10294 DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:HGNC Symbol;Acc:14884] T 339487 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:24094] T 51535 PPHLN1 periphilin 1 [Source:HGNC Symbol;Acc:19369] T 51439 FAM8A1 family with sequence similarity 8, member A1 [Source:HGNC Symbol;Acc:16372] T 6240 RRM1 ribonucleotide reductase M1 [Source:HGNC Symbol;Acc:10451] zzz999 84311 MRPL45 mitochondrial ribosomal protein L45 [Source:HGNC Symbol;Acc:16651] zzz999 28982 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 [Source:HGNC Symbol;Acc:24682] zzz999 388 RHOB ras homolog gene family, member B [Source:HGNC Symbol;Acc:668] P T 8455 ATRN attractin [Source:HGNC Symbol;Acc:885] T 51218 GLRX5 glutaredoxin 5 [Source:HGNC Symbol;Acc:20134] zzz999 55726 C12orf11 chromosome 12 open reading frame 11 [Source:HGNC Symbol;Acc:20174] T 51134 CCDC41 coiled-coil domain containing 41 [Source:HGNC Symbol;Acc:17966] zzz999 124808 CCDC43 coiled-coil domain containing 43 [Source:HGNC Symbol;Acc:26472] T 6709 SPTAN1 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) [Source:HGNC Symbol;Acc:11273] zzz999 112939 NACC1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing [Source:HGNC Symbol;Acc:20967] zzz999 10569 SLU7 SLU7 splicing factor homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16939] zzz999 912 CD1D CD1d molecule [Source:HGNC Symbol;Acc:1637] zzz999 65244 SPATS2 spermatogenesis associated, serine-rich 2 [Source:HGNC Symbol;Acc:18650] T 6448 SGSH N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:10818] zzz999 9859 CEP170 centrosomal protein 170kDa [Source:HGNC Symbol;Acc:28920] zzz999 84892 C3orf39 chromosome 3 open reading frame 39 [Source:HGNC Symbol;Acc:25902] T 55540 IL17RB interleukin 17 receptor B [Source:HGNC Symbol;Acc:18015] zzz999 54925 ZNF434 zinc finger protein 434 [Source:HGNC Symbol;Acc:20812] T 8801 SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit [Source:HGNC Symbol;Acc:11450] T 54951 COMMD8 COMM domain containing 8 [Source:HGNC Symbol;Acc:26036] T 10793 ZNF273 zinc finger protein 273 [Source:HGNC Symbol;Acc:13067] T 9240 PNMA1 paraneoplastic antigen MA1 [Source:HGNC Symbol;Acc:9158] zzz999 10671 DCTN6 dynactin 6 [Source:HGNC Symbol;Acc:16964] zzz999 56951 C5orf15 chromosome 5 open reading frame 15 [Source:HGNC Symbol;Acc:20656] T 2647 BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1 [Source:HGNC Symbol;Acc:4200] zzz999 26151 NAT9 N-acetyltransferase 9 (GCN5-related, putative) [Source:HGNC Symbol;Acc:23133] zzz999 553115 PEF1 penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:30009] zzz999 8844 KSR1 kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:6465] zzz999 3751 KCND2 potassium voltage-gated channel, Shal-related subfamily, member 2 [Source:HGNC Symbol;Acc:6238] T 7181 NR2C1 nuclear receptor subfamily 2, group C, member 1 [Source:HGNC Symbol;Acc:7971] T 147040 KCTD11 potassium channel tetramerisation domain containing 11 [Source:HGNC Symbol;Acc:21302] zzz999 55662 HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor [Source:HGNC Symbol;Acc:17113] P T 53346 TM6SF1 transmembrane 6 superfamily member 1 [Source:HGNC Symbol;Acc:11860] zzz999 55623 THUMPD1 THUMP domain containing 1 [Source:HGNC Symbol;Acc:23807] T 55276 PGM2 phosphoglucomutase 2 [Source:HGNC Symbol;Acc:8906] zzz999 55257 C20orf20 chromosome 20 open reading frame 20 [Source:HGNC Symbol;Acc:15866] zzz999 51135 IRAK4 interleukin-1 receptor-associated kinase 4 [Source:HGNC Symbol;Acc:17967] T 54665 RSBN1 round spermatid basic protein 1 [Source:HGNC Symbol;Acc:25642] P T 5601 MAPK9 mitogen-activated protein kinase 9 [Source:HGNC Symbol;Acc:6886] zzz999 6780 STAU1 staufen, RNA binding protein, homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:11370] zzz999 23107 MRPS27 mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:14512] zzz999 57544 TXNDC16 thioredoxin domain containing 16 [Source:HGNC Symbol;Acc:19965] T 23585 TMEM50A transmembrane protein 50A [Source:HGNC Symbol;Acc:30590] T 51510 CHMP5 chromatin modifying protein 5 [Source:HGNC Symbol;Acc:26942] zzz999 5739 PTGIR prostaglandin I2 (prostacyclin) receptor (IP) [Source:HGNC Symbol;Acc:9602] zzz999 26156 RSL1D1 ribosomal L1 domain containing 1 [Source:HGNC Symbol;Acc:24534] zzz999 51258 MRPL51 mitochondrial ribosomal protein L51 [Source:HGNC Symbol;Acc:14044] zzz999 11034 DSTN destrin (actin depolymerizing factor) [Source:HGNC Symbol;Acc:15750] zzz999 182 JAG1 jagged 1 [Source:HGNC Symbol;Acc:6188] zzz999 8683 SRSF9 serine/arginine-rich splicing factor 9 [Source:HGNC Symbol;Acc:10791] P T 5571 PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:HGNC Symbol;Acc:9385] zzz999 55654 TMEM127 transmembrane protein 127 [Source:HGNC Symbol;Acc:26038] zzz999 9536 PTGES prostaglandin E synthase [Source:HGNC Symbol;Acc:9599] zzz999 23142 DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:HGNC Symbol;Acc:28998] P T 151516 ASPRV1 aspartic peptidase, retroviral-like 1 [Source:HGNC Symbol;Acc:26321] zzz999 29988 SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 [Source:HGNC Symbol;Acc:13812] T 132001 C3orf31 chromosome 3 open reading frame 31 [Source:HGNC Symbol;Acc:25187] zzz999 9604 RNF14 ring finger protein 14 [Source:HGNC Symbol;Acc:10058] T 349075 ZNF713 zinc finger protein 713 [Source:HGNC Symbol;Acc:22043] zzz999 80173 IFT74 intraflagellar transport 74 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:21424] zzz999 10116 FEM1B fem-1 homolog b (C. elegans) [Source:HGNC Symbol;Acc:3649] zzz999 84919 PPP1R15B protein phosphatase 1, regulatory (inhibitor) subunit 15B [Source:HGNC Symbol;Acc:14951] T 51018 RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24255] T 6643 SNX2 sorting nexin 2 [Source:HGNC Symbol;Acc:11173] zzz999 3909 LAMA3 laminin, alpha 3 [Source:HGNC Symbol;Acc:6483] zzz999 9128 PRPF4 PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:HGNC Symbol;Acc:17349] T 152518 NFXL1 nuclear transcription factor, X-box binding-like 1 [Source:HGNC Symbol;Acc:18726] zzz999 60481 ELOVL5 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) [Source:HGNC Symbol;Acc:21308] T 57179 KIAA1191 KIAA1191 [Source:HGNC Symbol;Acc:29209] zzz999 10978 CLP1 CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16999] zzz999 6718 AKR1D1 aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase) [Source:HGNC Symbol;Acc:388] zzz999 10664 CTCF CCCTC-binding factor (zinc finger protein) [Source:HGNC Symbol;Acc:13723] zzz999 51163 DBR1 debranching enzyme homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:15594] zzz999 9499 MYOT myotilin [Source:HGNC Symbol;Acc:12399] zzz999 404672 GTF2H5 general transcription factor IIH, polypeptide 5 [Source:HGNC Symbol;Acc:21157] zzz999 310 ANXA7 annexin A7 [Source:HGNC Symbol;Acc:545] zzz999 51143 DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 [Source:HGNC Symbol;Acc:18745] T 11163 NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:HGNC Symbol;Acc:8051] T 29978 UBQLN2 ubiquilin 2 [Source:HGNC Symbol;Acc:12509] T 11160 ERLIN2 ER lipid raft associated 2 [Source:HGNC Symbol;Acc:1356] T 79898 ZNF613 zinc finger protein 613 [Source:HGNC Symbol;Acc:25827] zzz999 345778 MTX3 metaxin 3 [Source:HGNC Symbol;Acc:24812] P T 9043 SPAG9 sperm associated antigen 9 [Source:HGNC Symbol;Acc:14524] zzz999 55163 PNPO pyridoxamine 5'-phosphate oxidase [Source:HGNC Symbol;Acc:30260] T 9306 SOCS6 suppressor of cytokine signaling 6 [Source:HGNC Symbol;Acc:16833] P T 55922 NKRF NFKB repressing factor [Source:HGNC Symbol;Acc:19374] zzz999 50813 COPS7A COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) [Source:HGNC Symbol;Acc:16758] zzz999 53343 NUDT9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:HGNC Symbol;Acc:8056] T 4092 SMAD7 SMAD family member 7 [Source:HGNC Symbol;Acc:6773] P T 112752 C14orf179 chromosome 14 open reading frame 179 [Source:HGNC Symbol;Acc:29669] zzz999 51340 CRNKL1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [Source:HGNC Symbol;Acc:15762] T

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